Magnetic Cell Separation:Article Title: Visualization of T Cell Migration in the Spleen Reveals a Network of Perivascular Pathways that Guide Entry into T Zones
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Biotin B220, clone RA3-6B2 Biolegend Cat #: 103204; RRID: AB_312989 Biotin Cd11b, clone M1/70 Biolegend Cat #: 101204 RRID: AB_312787 Biotin Ly6G, clone 1A8 Biolegend Cat #: 127604; RRID: AB_1186108 Biotin CD49b, clone DX5 Biolegend Cat #: 108904; RRID: AB_313411 PE CD45, clone 30F11 Biolegend Cat #: 103106; RRID: AB_312971 PerCP/Cy5.5 TER119 Biolegend Cat #: 116227; RRID: AB_893638 PE CD19, clone 6D5 Biolegend Cat #: 115508; RRID: AB_313643 PE CD3, clone 17A2 Biolegend Cat #: 100206; RRID: AB_312663 Alexa700 B220, clone RA3-682 Biolegend Cat #: 103232; RRID: AB_493717 APC CD3, clone 145-2C11 Biolegend Cat #: 100236; RRID: AB_2561456 BV785 CD4, clone RM4-5 Biolegend Cat #: 100552; RRID: AB_2563053 BV605 CD8, clone 53-6.7 Biolegend Cat #: 100744; RRID: AB_2562609 APC-Cy7 CD45, clone 30-F11 Biolegend Cat #: 103116; RRID: AB_312981 APC-Cy7 TER119, clone TER-119 Biolegend Cat #: 116223; RRID: AB_2137788 APC CD31, clone MEC13.3 Biolegend Cat #: 102410; RRID: AB_312905 PE Podoplanin, GP38, clone 8.1.1 Biolegend Cat #: 127408; RRID: AB_2161928 Integrin alpha4, CD49d, clone PS/2 BioXcell Cat #: BE0071; RRID: AB_1107657 Integrin alphaL, CD11a, clone M17/4 BioXcell Cat #: BE0006; RRID: AB_1107578 FITC CD169, clone 3D6.112 BIO-RAD Cat #: MCA884FT; RRID: AB_1100895 GFP, rabbit polyclonal Thermo Fisher Cat #: A-11122; RRID: AB_221569 Alkaline Phosphatase anti-Fluorescein, polyclonal Sigma Cat #: 11426338910 Roche; RRID: AB_2734723 HRP anti-rabbit, polyclonal Thermo Fisher Cat #: 31460; RRID: AB_228341 Alexa647 CD169, clone 3D6.112 BIO-RAD Cat #: MCA947A647; RRID: AB_10545834 CD31, clone MEC13.3 BD Biosciences Cat #: 557355; RRID: AB_396660 (Continued on next page) e1 Immunity 52, 794–807.e1–e7, May 19, 2020 .. REAGENT or RESOURCE SOURCE IDENTIFIER Biotin CD140b, PDGFR beta, clone APB5 Biolegend Cat #: 136010; RRID: AB_2236916 ER-TR7, clone ER-TR7 BioXcell Cat #: BE0253; RRID: AB_2687734 Biotin CCL21, polyclonal R&D systems Cat #: BAF457; RRID: AB_2072082 Podoplanin, GP38, clone 8-1-1 eBioscience Cat #: 14-5381-82; RRID: AB_1210505 Alexa488 anti-rat IgG Thermo Fisher Cat #: A21208; RRID: AB_2535794 eFluor660 anti-rat IgG Thermo Fisher Cat #: 50-4017-82; RRID: AB_2574211 Alexa488 anti-rabbit igG Thermo Fisher Cat #: A-11008; RRID: AB_143165 Alexa647 anti-Armenian hamster IgG Jackson ImmunoResearch Cat #: 127-605-160; RRID: AB-2339001 Biotin CD4 Biolegend Cat #: 100508; RRID: AB-312711 Alexa647 B220, clone RA3-6B2 Biolegend Cat #: 103226; RRID: AB-389330 Cy3 aplphaSMA, clone 1A4 Sigma Cat #: C6198-100UL; RRID: AB-476856 Rabbit anti-EYFP living colors full length GFP, polyclonal Takara Cat #: 632592; RRID: AB-2336883 Goat anti-CCL21 R&D systems Cat #: AF457; RRID: AB-2072083 Rat anti-ER-TR7 Abcam Cat #: ab51824; RRID: AB-881651 Alexa488 anti-rabbit IgG Jackson ImmunoResearch Cat #: 111-547-003; RRID: AB-2338058 Dylight549 anti-rat IgG Jackson ImmunoResearch Cat #: 112-505-175; RRID: AB-2338335 Dylight549 anti-Syrian Hamster IgG Jackson ImmunoResearch Cat #: 307-506-003; RRID: AB-2339595 Critical Commercial Assays Alexa488 streptavidin Invitrogen Cat #: S11223 Cy3 streptavidin Jackson ImmunoResearch Cat #: 016-160-084 Alexa647 streptavidin Jackson ImmunoResearch Cat #: 016-600-084 BioMag Goat anti-rat IgG QIAGEN Cat #: 310107 CFSE 5-(and 6-)-carboxyfluorescein diacetate succinimidyl ester Life Technologies Cat #: C1157 Cell tracker blue probe CMAC 7amino4chloromethylcoumarin Life Technologies Cat #: C2110 Cell Tracker orange CMTMR Life Technologies Cat #: C2927 Pertussis Toxin Islet Activating Protein Salt-Free (PTX) Quadratech Diagnostics Ltd. Cat #: 181 LPS, Escherichia coli 0111:B4 Sigma Aldrich Cat #: L4391 Dextran-FITC 2000KDa Sigma Aldrich Cat #: FD2000S Collagenase P Sigma Aldrich Cat #: 11213857001 Dispase I Sigma Aldrich Cat #: D4818-2MG MACS TER119 microbeads Miltenyi Biotec Cat #: 130-049-901 MACS CD45 microbeads Miltenyi Biotec Cat #: 130-052-301 (Continued on next page) ll Article Immunity 52, 794–807.e1–e7, May 19, 2020 e2 .. REAGENT or RESOURCE SOURCE IDENTIFIER Experimental Models: Organisms/Strains Actin-CFP mice, Tg(ACTB-ECFP)1Nagy/J Jackson Laboratory 004218 Ccr7 / mice, B6.129P2(C)-Ccr7tm1Rfor/J Jackson Laboratory 006621 Ubi-GFP mice, C57BL/6-Tg(UB C-GFP)30Scha/J Jackson Laboratory 004353 Rosa26-YFP mice, B6.129X1Gt(ROSA)26Sortm1(EYFP)cos/J Jackson Laboratory 001648 CD19cre/cre mice, B6.129P2(C)-Cd19tm1(Cre)Cgn/J Jackson Laboratory 006785 Tlr4 / mice, B6(Cg)-Tlr4tm1.2Karp/J Jackson Laboratory 029015 Ubi-PA-GFP mice, B6.Cg-PtprcaTg(UBCPA-GFP)1Mnz/J Jackson Laboratory 022486 hCD2-DsRred mice Veiga-Fernandes et al., 2007 N/A VE-cadherin-tdTomato, C57BL/6Tg(Cdh5-cre/ERT2)rosa26-TdTomato Kindly provided by Dr. Bostjan MArkelc, Oxford University N/A BAC-transgenic C57BL/6-Tg(Ccl19-tTA)687BIAT Available under MTA, laboratory of Dr. Burkhard Ludewig N/A LC1 Schönig et al., 2002 N/A Oligonucleotides qPCR primers Ccl19 FP: CTG CAA GAG AAC TGA ACA GAC Life Technologies N/A qPCR primers Ccl19 RP: CTT CTG ACT CTC TAG GTC TAC Life Technologies N/A qPCR primers Ccl21 FP: ATCGTGAAAGCCTTCGCTACCTT Life Technologies N/A qPCR primers Ccl21 RP: GCTGTTGCCTTTGTTCTTGGCAGA Life Technologies N/A qPCR primers GAPDH FP: AGGTCGGTGTGAACGGATTTG Life Technologies N/A qPCR primers GAPDH RP: TGTAGACCATGTAGTTGAGGTCA Life Technologies N/A QuantiTect Primers Hprt QIAGEN QT00166768 QuantiTect Primers Ccl19 QIAGEN QT02532173 QuantiTect Primers Ccl21a QIAGEN QT00284753 Software and Algorithms FlowJo 9.7.1 (Treestar inc) https://www.flowjo.com/ RRID: SCR_008520 Graphpad prism version 8 https://www.graphpad.com/scientific- software/prism/ RRID: SCR_002798 Adobe illustrator CS6 http://www.adobe.com/products/ illustrator.html RRID: SCR_010279 Imaris 9.2.1 http://www.bitplane.com/imaris/imaris RRID: SCR_007370 Fiji, ImageJ, NIH Bethesda http://fiji.sc/ RRID: SCR_002285 ZEN Digital Imaging for Light Microscopy http://www.zeiss.com/microscopy/en_us/ products/microscope-software/ zen.html#introduction RRID: SCR_013672 ll Article
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Article Snippet: Goat Anti-Mouse Ccl21 / 6ckine Polyclonal antibody, Biotin Conjugated , R and D Systems , Cat# BAF457; RRID:AB_2072082.
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